STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDZ40667.1Conserved hypothetical protein. (158 aa)    
Predicted Functional Partners:
EDZ41560.1
Conserved hypothetical protein; [Q] COG4665 TRAP-type mannitol/chloroaromatic compound transport system, small permease component.
  
     0.772
EDZ40831.1
TRAP transporter, DctM-like membrane protein; [R] COG4666 TRAP-type uncharacterized transport system, fused permease components.
  
     0.765
EDZ43711.1
OmpA/MotB; [P] COG0226 ABC-type phosphate transport system, periplasmic component.
  
     0.641
EDZ40944.1
3-hydroxyisobutyrate dehydrogenase family protein; [G] COG1023 Predicted 6-phosphogluconate dehydrogenase.
       0.580
EDZ42157.1
Conserved hypothetical protein; [M] COG0463 Glycosyltransferases involved in cell wall biogenesis.
  
     0.493
EDZ42438.1
Conserved hypothetical protein.
  
     0.480
RB2083_34
Glycosyl transferase, group 2 family protein; [M] COG0463 Glycosyltransferases involved in cell wall biogenesis.
  
     0.475
EDZ42806.1
Conserved hypothetical protein.
  
     0.459
EDZ44315.1
Conserved hypothetical protein.
  
     0.459
EDZ43576.1
Trap dicarboxylate transporter- dctp subunit; [Q] COG4663 TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component.
  
     0.437
Your Current Organism:
Rhodobacteraceae bacterium HTCC2083
NCBI taxonomy Id: 314270
Other names: R. bacterium HTCC2083, Rhodobacterales bacterium HTCC2083
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.