STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDZ42311.1Chain length determinant protein; [M] COG3524 Capsule polysaccharide export protein. (536 aa)    
Predicted Functional Partners:
kpsT
Capsular polysaccharide export ATP-binding protein; [V] COG1131 ABC-type multidrug transport system, ATPase component.
 
 
 0.998
EDZ42036.1
[M] COG1596 Periplasmic protein involved in polysaccharide export.
 
  
 0.985
EDZ44426.1
ABC transporter, permease protein; [GM] COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component.
 
 
 0.984
kpsC
[M] COG3563 Capsule polysaccharide export protein.
 
  
 0.982
EDZ44609.1
ABC transporter permease protein; [GM] COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component.
  
 
 0.944
EDZ40727.1
Conserved hypothetical protein.
  
    0.907
kpsS
[M] COG3562 Capsule polysaccharide export protein.
 
 
 
 0.885
kdsA
[E] COG2876 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase; Belongs to the KdsA family.
  
    0.858
EDZ42416.1
Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; [G] COG1109 Phosphomannomutase.
       0.815
EDZ41606.1
Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
 
    0.787
Your Current Organism:
Rhodobacteraceae bacterium HTCC2083
NCBI taxonomy Id: 314270
Other names: R. bacterium HTCC2083, Rhodobacterales bacterium HTCC2083
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.