STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDZ42358.1Conserved hypothetical protein. (288 aa)    
Predicted Functional Partners:
EDZ42798.1
[GER] COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily.
      0.870
EDZ43413.1
Protein secretion ABC efflux system, permease and ATP-binding protein; [V] COG1132 ABC-type multidrug transport system, ATPase and permease components.
   
  0.867
EDZ43013.1
ATPase, AAA family protein; [O] COG0464 ATPases of the AAA+ class.
   
 0.838
metA
Homoserine O-succinyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine; Belongs to the MetA family.
 
     0.835
EDZ43274.1
KR domain family; [Q] COG3321 Polyketide synthase modules and related proteins.
  
 0.804
EDZ42568.1
[R] COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
  
    0.776
EDZ43389.1
ABC transporter, ATP-binding/permease protein; [V] COG1132 ABC-type multidrug transport system, ATPase and permease components.
    
 0.730
EDZ43693.1
[IQ] COG0236 Acyl carrier protein; phosphopantetheine-binding.
  
 
 
 0.725
EDZ43480.1
Membrane protein; [Q] COG0767 ABC-type transport system involved in resistance to organic solvents, permease component.
  
 0.704
EDZ41997.1
ABC transporter, ATP-binding protein; [V] COG1131 ABC-type multidrug transport system, ATPase component.
   
 0.676
Your Current Organism:
Rhodobacteraceae bacterium HTCC2083
NCBI taxonomy Id: 314270
Other names: R. bacterium HTCC2083, Rhodobacterales bacterium HTCC2083
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.