STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDZ42462.1Acetyltransferase, gnat family; [KR] COG0454 Histone acetyltransferase HPA2 and related acetyltransferases. (149 aa)    
Predicted Functional Partners:
iunH
[F] COG1957 Inosine-uridine nucleoside N-ribohydrolase.
       0.816
selO
Hypothetical protein; Catalyzes the transfer of adenosine 5'-monophosphate (AMP) to Ser, Thr or Tyr residues of target proteins (AMPylation). Belongs to the SELO family.
       0.799
EDZ43000.1
Conserved hypothetical protein.
   
   0.776
EDZ42968.1
Transcriptional regulator, XRE family; [K] COG1396 Predicted transcriptional regulators.
  
  
  0.643
EDZ41984.1
SH3, type 3.
  
     0.598
EDZ44168.1
MazG family protein; [R] COG1694 Predicted pyrophosphatase.
       0.587
EDZ43356.1
Conserved hypothetical protein.
  
     0.574
EDZ42963.1
Conserved hypothetical protein.
  
     0.569
EDZ43864.1
Conserved hypothetical protein.
  
     0.539
EDZ42985.1
Phosphoglycerate mutase family protein; [G] COG0406 Fructose-2,6-bisphosphatase; Belongs to the phosphoglycerate mutase family.
  
    0.522
Your Current Organism:
Rhodobacteraceae bacterium HTCC2083
NCBI taxonomy Id: 314270
Other names: R. bacterium HTCC2083, Rhodobacterales bacterium HTCC2083
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.