STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDZ42501.1Hemolysin-type calcium-binding region; [Q] COG2931 RTX toxins and related Ca2+-binding proteins. (168 aa)    
Predicted Functional Partners:
EDZ40763.1
Type I secretion target GGXGXDXXX repeat protein domain protein; [Q] COG2931 RTX toxins and related Ca2+-binding proteins.
  
     0.775
EDZ44484.1
Type I secretion target repeat protein; [Q] COG2931 RTX toxins and related Ca2+-binding proteins.
  
     0.754
EDZ44082.1
Hemolysin-type calcium-binding region; [Q] COG2931 RTX toxins and related Ca2+-binding proteins.
 
 
0.710
EDZ40761.1
Hemolysin-type calcium-binding region; [Q] COG2931 RTX toxins and related Ca2+-binding proteins.
  
  0.698
EDZ42252.1
Conserved hypothetical protein; [U] COG3210 Large exoproteins involved in heme utilization or adhesion.
  
  0.637
EDZ43993.1
Na-Ca exchanger/integrin-beta4; [Q] COG2931 RTX toxins and related Ca2+-binding proteins.
       0.605
EDZ42519.1
Type I secretion membrane fusion protein, HlyD; [M] COG0845 Membrane-fusion protein.
 
  
 0.584
EDZ44013.1
Type I secretion target repeat protein; [Q] COG2931 RTX toxins and related Ca2+-binding proteins.
  
     0.559
EDZ43413.1
Protein secretion ABC efflux system, permease and ATP-binding protein; [V] COG1132 ABC-type multidrug transport system, ATPase and permease components.
 
  
 0.544
EDZ44283.1
Beta-galactosidase; [G] COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase.
   
   0.524
Your Current Organism:
Rhodobacteraceae bacterium HTCC2083
NCBI taxonomy Id: 314270
Other names: R. bacterium HTCC2083, Rhodobacterales bacterium HTCC2083
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