Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EDZ42508.1 | phaP | RB2083_2023 | RB2083_1660 | Hypothetical protein. | Phasin, PhaP; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. | 0.458 |
EDZ42508.1 | phaZ | RB2083_2023 | RB2083_3790 | Hypothetical protein. | Polyhydroxyalkanoate depolymerase, intracellular; [I] COG4553 Poly-beta-hydroxyalkanoate depolymerase. | 0.569 |
EDZ42508.1 | phbC | RB2083_2023 | RB2083_426 | Hypothetical protein. | Poly-beta-hydroxybutyrate polymerase; [I] COG3243 Poly(3-hydroxyalkanoate) synthetase. | 0.709 |
phaP | EDZ42508.1 | RB2083_1660 | RB2083_2023 | Phasin, PhaP; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. | Hypothetical protein. | 0.458 |
phaP | phaZ | RB2083_1660 | RB2083_3790 | Phasin, PhaP; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. | Polyhydroxyalkanoate depolymerase, intracellular; [I] COG4553 Poly-beta-hydroxyalkanoate depolymerase. | 0.885 |
phaP | phbC | RB2083_1660 | RB2083_426 | Phasin, PhaP; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. | Poly-beta-hydroxybutyrate polymerase; [I] COG3243 Poly(3-hydroxyalkanoate) synthetase. | 0.873 |
phaZ | EDZ42508.1 | RB2083_3790 | RB2083_2023 | Polyhydroxyalkanoate depolymerase, intracellular; [I] COG4553 Poly-beta-hydroxyalkanoate depolymerase. | Hypothetical protein. | 0.569 |
phaZ | phaP | RB2083_3790 | RB2083_1660 | Polyhydroxyalkanoate depolymerase, intracellular; [I] COG4553 Poly-beta-hydroxyalkanoate depolymerase. | Phasin, PhaP; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. | 0.885 |
phaZ | phbC | RB2083_3790 | RB2083_426 | Polyhydroxyalkanoate depolymerase, intracellular; [I] COG4553 Poly-beta-hydroxyalkanoate depolymerase. | Poly-beta-hydroxybutyrate polymerase; [I] COG3243 Poly(3-hydroxyalkanoate) synthetase. | 0.992 |
phbC | EDZ42508.1 | RB2083_426 | RB2083_2023 | Poly-beta-hydroxybutyrate polymerase; [I] COG3243 Poly(3-hydroxyalkanoate) synthetase. | Hypothetical protein. | 0.709 |
phbC | phaP | RB2083_426 | RB2083_1660 | Poly-beta-hydroxybutyrate polymerase; [I] COG3243 Poly(3-hydroxyalkanoate) synthetase. | Phasin, PhaP; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. | 0.873 |
phbC | phaZ | RB2083_426 | RB2083_3790 | Poly-beta-hydroxybutyrate polymerase; [I] COG3243 Poly(3-hydroxyalkanoate) synthetase. | Polyhydroxyalkanoate depolymerase, intracellular; [I] COG4553 Poly-beta-hydroxyalkanoate depolymerase. | 0.992 |