STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDZ40727.1Conserved hypothetical protein. (259 aa)    
Predicted Functional Partners:
EDZ42311.1
Chain length determinant protein; [M] COG3524 Capsule polysaccharide export protein.
  
    0.907
EDZ42365.1
Conserved hypothetical protein.
  
     0.773
EDZ43554.1
core-2/I-branching enzyme family protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.772
EDZ42882.1
EpsK domain protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.771
EDZ44426.1
ABC transporter, permease protein; [GM] COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component.
  
    0.771
EDZ41930.1
Conserved hypothetical protein.
  
     0.769
EDZ41606.1
Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.765
EDZ44498.1
Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.765
kpsT
Capsular polysaccharide export ATP-binding protein; [V] COG1131 ABC-type multidrug transport system, ATPase component.
  
    0.758
kpsS
[M] COG3562 Capsule polysaccharide export protein.
  
     0.752
Your Current Organism:
Rhodobacteraceae bacterium HTCC2083
NCBI taxonomy Id: 314270
Other names: R. bacterium HTCC2083, Rhodobacterales bacterium HTCC2083
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.