STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDZ42900.1Antenna complex alpha/beta subunit, putative; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers. (52 aa)    
Predicted Functional Partners:
EDZ42894.1
Antenna complex alpha/beta subunit, putative; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers.
 
 0.999
pufL
Photosynthetic reaction center L subunit; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit; Belongs to the reaction center PufL/M/PsbA/D family.
 
 
 0.998
pufM
Photosynthetic reaction center M subunit; The reaction center is a membrane-bound complex that mediates the initial photochemical event in the electron transfer process of photosynthesis.
 
 0.998
puhA
Photosynthetic reaction center H subunit.
  
 
 0.995
bchY
Chlorophyllide reductase subunit Y.
 
  
 0.915
bchZ
Chlorophyllide reductase subunit Z; [I] COG0736 Phosphopantetheinyl transferase (holo-ACP synthase).
 
   
 0.890
acsF
Magnesium-protoporphyrin IX monomethyl ester aerobic oxidative cyclase; Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME); Belongs to the AcsF family.
  
   
 0.847
EDZ44122.1
B12 binding domain protein.
  
   
 0.805
crtC
Hydroxyneurosporene synthase (CrtC).
 
     0.796
crtF
[QR] COG0500 SAM-dependent methyltransferases.
 
     0.787
Your Current Organism:
Rhodobacteraceae bacterium HTCC2083
NCBI taxonomy Id: 314270
Other names: R. bacterium HTCC2083, Rhodobacterales bacterium HTCC2083
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