STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDZ43052.1Acetyltransferase, gnat family; [M] COG1247 Sortase and related acyltransferases. (162 aa)    
Predicted Functional Partners:
EDZ42286.1
Metal dependent phosphohydrolase; [R] COG1896 Predicted hydrolases of HD superfamily.
       0.846
EDZ42726.1
YHS domain protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
       0.551
EDZ41694.1
Conserved hypothetical protein.
  
     0.485
EDZ41298.1
Conserved hypothetical protein.
 
  
  0.481
EDZ42229.1
Hypothetical protein.
       0.476
ahcY
Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.
       0.472
EDZ44483.1
Conserved hypothetical protein.
  
     0.462
EDZ41598.1
methylmalonyl-CoA carboxyltransferase 12S subunit, putative; [I] COG0511 Biotin carboxyl carrier protein.
   
  0.458
RB2083_37
Aminotransferase class-III; [J] COG0093 Ribosomal protein L14; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
    
 0.427
EDZ42362.1
Conserved hypothetical protein; [R] COG1647 Esterase/lipase.
 
     0.408
Your Current Organism:
Rhodobacteraceae bacterium HTCC2083
NCBI taxonomy Id: 314270
Other names: R. bacterium HTCC2083, Rhodobacterales bacterium HTCC2083
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.