STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDZ43058.1ABC transporter, permease/ATP-binding protein; [E] COG4177 ABC-type branched-chain amino acid transport system, permease component; Belongs to the binding-protein-dependent transport system permease family. (431 aa)    
Predicted Functional Partners:
EDZ41511.1
ABC transporter, permease/ATP-binding protein; [G] COG1129 ABC-type sugar transport system, ATPase component.
 
  0.999
EDZ42405.1
Inner-membrane translocator; [G] COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components.
 
 0.999
EDZ42571.1
Abc-type transporter, periplasmic component: haat family; [E] COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component.
 
 
  0.994
EDZ42738.1
Abc-type transporter, atpase component: haat family; [E] COG1126 ABC-type polar amino acid transport system, ATPase component.
 
  0.989
EDZ43060.1
Branched-chain amino acid ABC transporter, ATP-binding protein; [G] COG1129 ABC-type sugar transport system, ATPase component.
 
  0.969
RB2083_98
Branched-chain amino acid ABC transporter, ATP-binding protein; [G] COG1129 ABC-type sugar transport system, ATPase component.
 
  0.960
EDZ41207.1
Branched-chain amino acid ABC transporter, ATP-binding protein; [J] COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases.
 
  0.941
livG
Branched-chain amino acid ABC transporter, ATP-binding protein; [J] COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases.
 
  0.940
EDZ43411.1
[E] COG0559 Branched-chain amino acid ABC-type transport system, permease components; Belongs to the binding-protein-dependent transport system permease family.
 
 
  0.937
EDZ44304.1
Branched-chain amino acid ABC transporter, ATP-binding protein; [G] COG1129 ABC-type sugar transport system, ATPase component.
 
  0.925
Your Current Organism:
Rhodobacteraceae bacterium HTCC2083
NCBI taxonomy Id: 314270
Other names: R. bacterium HTCC2083, Rhodobacterales bacterium HTCC2083
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