STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDZ43073.1Transglycosylase SLT domain protein. (260 aa)    
Predicted Functional Partners:
EDZ41140.1
Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.722
fliD
Putative flagellar hook-associated protein 2 (filament cap protein); Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.
  
  
 0.645
EDZ41641.1
Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.563
fliM
[N] COG1868 Flagellar motor switch protein.
  
    0.562
EDZ40594.1
Conserved hypothetical protein.
 
    0.549
fliE_2
[NU] COG1677 Flagellar hook-basal body protein.
  
  
 0.526
fliE_1
[NU] COG1677 Flagellar hook-basal body protein.
  
  
 0.526
EDZ41443.1
Conserved hypothetical protein.
  
     0.525
fliI
[C] COG0056 F0F1-type ATP synthase, alpha subunit.
  
  
 0.522
EDZ44416.1
Flagellum-specific ATP synthase; [NU] COG1157 Flagellar biosynthesis/type III secretory pathway ATPase.
  
  
 0.522
Your Current Organism:
Rhodobacteraceae bacterium HTCC2083
NCBI taxonomy Id: 314270
Other names: R. bacterium HTCC2083, Rhodobacterales bacterium HTCC2083
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.