STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDZ43206.1Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. (119 aa)    
Predicted Functional Partners:
EDZ41797.1
Conserved hypothetical protein.
  
     0.768
EDZ41436.1
Conserved hypothetical protein.
  
     0.764
lysM_1
LysM domain.
  
     0.760
EDZ44504.1
Conserved hypothetical protein.
  
     0.713
EDZ42764.1
ATPase; [L] COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member.
  
     0.698
EDZ42295.1
Conserved hypothetical protein.
  
     0.696
EDZ42715.1
Conserved hypothetical protein.
  
     0.685
EDZ40845.1
Lipoprotein, putative.
  
     0.685
EDZ41115.1
[R] COG5342 Invasion protein B, involved in pathogenesis.
  
     0.661
EDZ41411.1
Secreted periplasmic protein.
  
     0.656
Your Current Organism:
Rhodobacteraceae bacterium HTCC2083
NCBI taxonomy Id: 314270
Other names: R. bacterium HTCC2083, Rhodobacterales bacterium HTCC2083
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.