STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ugpBSN-glycerol-3-phophate ABC transporter, periplasmic SN-glycerol-3-phosphate-binding protein; [G] COG1653 ABC-type sugar transport system, periplasmic component. (457 aa)    
Predicted Functional Partners:
ugpE
Sn-glycerol-3-phosphate transport system permease protein; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane.
 
 0.997
EDZ43673.1
Sn-glycerol-3-phosphate ABC transporter,permease protein; [G] COG1175 ABC-type sugar transport systems, permease components.
 
  0.997
upgC
SN-glycerol-3-phosphate ABC transporter, ATP-binding protein; Part of the ABC transporter complex UgpABCE involved in sn- glycerol-3-phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. sn-glycerol-3- phosphate importer (TC 3.A.1.1.3) family.
  0.989
EDZ43525.1
[G] COG0395 ABC-type sugar transport system, permease component.
  
 0.877
EDZ43096.1
Inner membrane component of binding-protein-dependent transport system; [G] COG0395 ABC-type sugar transport system, permease component.
 
 0.853
ycjP
[G] COG0395 ABC-type sugar transport system, permease component.
  
 0.851
EDZ44621.1
Binding-protein-dependent transport systems inner membrane component; [G] COG0395 ABC-type sugar transport system, permease component.
  
 0.851
EDZ44349.1
[G] COG3833 ABC-type maltose transport systems, permease component; overlaps another CDS with the same product name.
  
 0.816
EDZ41239.1
Inner membrane component of binding-protein-dependent transport system; [G] COG1175 ABC-type sugar transport systems, permease components.
 
  0.805
EDZ43985.1
[G] COG1175 ABC-type sugar transport systems, permease components.
 
  0.802
Your Current Organism:
Rhodobacteraceae bacterium HTCC2083
NCBI taxonomy Id: 314270
Other names: R. bacterium HTCC2083, Rhodobacterales bacterium HTCC2083
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