STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDZ43554.1core-2/I-branching enzyme family protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. (559 aa)    
Predicted Functional Partners:
EDZ41930.1
Conserved hypothetical protein.
     0.983
EDZ41606.1
Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
 
   
 0.970
EDZ44426.1
ABC transporter, permease protein; [GM] COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component.
 
     0.815
EDZ43204.1
Glycosyl transferase, group 1; [M] COG0438 Glycosyltransferase.
 
     0.799
EDZ40624.1
Conserved hypothetical protein.
  
     0.775
EDZ42396.1
Type I secretion target repeat protein.
  
     0.774
EDZ42365.1
Conserved hypothetical protein.
  
     0.773
EDZ42977.1
[EH] COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase.
       0.773
EDZ41596.1
Type I secretion target repeat protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.772
EDZ40727.1
Conserved hypothetical protein.
  
     0.772
Your Current Organism:
Rhodobacteraceae bacterium HTCC2083
NCBI taxonomy Id: 314270
Other names: R. bacterium HTCC2083, Rhodobacterales bacterium HTCC2083
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.