STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDZ43562.1Oxidoreductase, FAD/FMN-binding family; [C] COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family. (764 aa)    
Predicted Functional Partners:
badA
Benzoate-coenzyme A ligase; [I] COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases.
 
 0.997
EDZ42059.1
Short-chain dehydrogenase/reductase SDR; [IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 0.967
EDZ42999.1
Transcriptional regulator, MarR family; [K] COG1846 Transcriptional regulators.
 
  
 0.965
EDZ43768.1
[I] COG1960 Acyl-CoA dehydrogenases.
 
 0.958
EDZ42355.1
[I] COG1024 Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
  
 0.955
etfB
[C] COG2086 Electron transfer flavoprotein, beta subunit.
  
 
 0.842
EDZ41027.1
Oxidoreductase, short chain dehydrogenase/reductase family; [IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
  
 0.826
EDZ41396.1
Hypothetical protein; [C] COG2218 Formylmethanofuran dehydrogenase subunit C; Conserved region in glutamate synthase family.
    
 0.826
EDZ44489.1
Endoribonuclease L-PSP; [J] COG0251 Putative translation initiation inhibitor, yjgF family.
 
    0.805
etfA
[C] COG2025 Electron transfer flavoprotein, alpha subunit.
   
 
 0.793
Your Current Organism:
Rhodobacteraceae bacterium HTCC2083
NCBI taxonomy Id: 314270
Other names: R. bacterium HTCC2083, Rhodobacterales bacterium HTCC2083
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.