STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDZ43580.1Efflux transporter, RND family, MFP subunit; [M] COG0845 Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (409 aa)    
Predicted Functional Partners:
EDZ44502.1
RND transporter, HAE1/HME family, permease protein; [V] COG0841 Cation/multidrug efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.999
EDZ44110.1
RND transporter, HAE1/HME family, permease protein; [V] COG0841 Cation/multidrug efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.996
EDZ41053.1
[MU] COG1538 Outer membrane protein.
  
 0.994
attG
ABC transporter, membrane spanning protein; [Q] COG3127 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component.
  
 
 0.988
EDZ41096.1
Outer membrane efflux protein.
  
 0.981
EDZ44296.1
Efflux transporter, RND family, MFP subunit; [V] COG1566 Multidrug resistance efflux pump.
 
 
 0.952
EDZ42495.1
Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
 0.936
EDZ43011.1
Macrolide export ATP-binding/permease protein MacB, putative; [M] COG4591 ABC-type transport system, involved in lipoprotein release, permease component.
  
 
 0.933
EDZ44140.1
Macrolide export ATP-binding/permease protein MacB; [V] COG1136 ABC-type antimicrobial peptide transport system, ATPase component.
  
 
 0.875
EDZ42745.1
Lipoprotein-releasing system ATP-binding protein LolD; [V] COG1136 ABC-type antimicrobial peptide transport system, ATPase component.
  
 
 0.855
Your Current Organism:
Rhodobacteraceae bacterium HTCC2083
NCBI taxonomy Id: 314270
Other names: R. bacterium HTCC2083, Rhodobacterales bacterium HTCC2083
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