STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDZ43631.1Extracellular solute-binding protein, family 5; [E] COG0747 ABC-type dipeptide transport system, periplasmic component. (645 aa)    
Predicted Functional Partners:
EDZ43186.1
[EP] COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
  
 0.951
EDZ43033.1
Binding-protein-dependent transport systems inner membrane component; [R] COG4239 ABC-type uncharacterized transport system, permease component.
 
 
 0.942
yejF
Oligopeptide/dipeptide uptake family ABC transporter, ATP-binding protein; [R] COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase; Belongs to the ABC transporter superfamily.
 
 
 0.877
EDZ44084.1
Peptide/opine/nickel uptake family ABC transporter, ATP-binding protein; [R] COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase; Belongs to the ABC transporter superfamily.
 
 
 0.619
EDZ41968.1
ABC transporter ATP-binding protein; [E] COG4608 ABC-type oligopeptide transport system, ATPase component; Belongs to the ABC transporter superfamily.
  
 
 0.535
EDZ42536.1
ABC transporter ATP-binding protein; [R] COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase; Belongs to the ABC transporter superfamily.
  
 
 0.535
EDZ43179.1
Oligopeptide/dipeptide ABC transporter, ATPase subunit; [R] COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase; Belongs to the ABC transporter superfamily.
  
 
 0.535
EDZ42019.1
Nickel import ATP-binding protein NikD; [R] COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase.
  
 
 0.531
EDZ40674.1
ABC transporter substrate-binding protein; [E] COG0747 ABC-type dipeptide transport system, periplasmic component.
  
 
 0.530
EDZ40693.1
Peptide/opine/nickel uptake family ABC transporter, periplasmic substrate-binding protein; [E] COG0747 ABC-type dipeptide transport system, periplasmic component.
  
 
 0.530
Your Current Organism:
Rhodobacteraceae bacterium HTCC2083
NCBI taxonomy Id: 314270
Other names: R. bacterium HTCC2083, Rhodobacterales bacterium HTCC2083
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.