STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDZ43688.1[C] COG3038 Cytochrome B561; Belongs to the UPF0312 family. (394 aa)    
Predicted Functional Partners:
EDZ43100.1
YceI; [S] COG2353 Uncharacterized conserved protein; Belongs to the UPF0312 family.
 
  
 0.817
EDZ43359.1
YceI; [S] COG2353 Uncharacterized conserved protein; Belongs to the UPF0312 family.
 
  
 0.816
EDZ43617.1
[C] COG3038 Cytochrome B561; Belongs to the UPF0312 family.
  
  
 0.521
EDZ43148.1
Glutamate synthase domain protein; [C] COG1304 L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases; Belongs to the glutamate synthase family.
       0.505
EDZ42580.1
Hypothetical protein.
       0.486
EDZ44340.1
Conserved hypothetical protein.
  
     0.433
EDZ41462.1
Electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone.
  
  
 0.409
Your Current Organism:
Rhodobacteraceae bacterium HTCC2083
NCBI taxonomy Id: 314270
Other names: R. bacterium HTCC2083, Rhodobacterales bacterium HTCC2083
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