Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDZ43690.1Lipid A export ATP-binding/permease protein MsbA; [V] COG1132 ABC-type multidrug transport system, ATPase and permease components. (581 aa)    
Predicted Functional Partners:
potA-2
Polyamine ABC transporter, ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
 
   
 
0.913
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.858
EDZ42927.1
[T] COG2365 Protein tyrosine/serine phosphatase.
 
     0.837
EDZ43274.1
KR domain family; [Q] COG3321 Polyketide synthase modules and related proteins.
  
 0.823
EDZ41629.1
Permease YjgP/YjgQ family protein; [R] COG0795 Predicted permeases.
 
 
 0.815
EDZ42099.1
Ferric cations import ATP-binding protein FbpC 2; [E] COG3842 ABC-type spermidine/putrescine transport systems, ATPase components; Belongs to the ABC transporter superfamily.
 
  
 
0.808
EDZ43389.1
ABC transporter, ATP-binding/permease protein; [V] COG1132 ABC-type multidrug transport system, ATPase and permease components.
    
 0.804
EDZ41291.1
Permease, YjgP/YjgQ family; [R] COG0795 Predicted permeases.
 
 
 0.801
EDZ43413.1
Protein secretion ABC efflux system, permease and ATP-binding protein; [V] COG1132 ABC-type multidrug transport system, ATPase and permease components.
   
 0.795
EDZ42551.1
Methionine import ATP-binding protein MetN 2; [G] COG3839 ABC-type sugar transport systems, ATPase components.
  
0.752
Your Current Organism:
Rhodobacteraceae bacterium HTCC2083
NCBI taxonomy Id: 314270
Other names: R. bacterium HTCC2083, Rhodobacterales bacterium HTCC2083
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