STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDZ43801.1Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. (377 aa)    
Predicted Functional Partners:
EDZ43013.1
ATPase, AAA family protein; [O] COG0464 ATPases of the AAA+ class.
 
     0.938
EDZ44486.1
Conserved hypothetical protein; [NT] COG0840 Methyl-accepting chemotaxis protein.
 
     0.919
EDZ41017.1
Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
 
     0.858
EDZ43364.1
Conserved hypothetical protein.
 
     0.783
EDZ41708.1
Hypothetical protein.
       0.773
EDZ44407.1
Endonuclease/exonuclease/phosphatase, putative.
  
     0.700
EDZ44081.1
Hypothetical protein; [R] COG0457 FOG: TPR repeat; tetratricopeptide TPR_2.
  
     0.625
EDZ40948.1
[M] COG0668 Small-conductance mechanosensitive channel.
  
     0.577
EDZ44483.1
Conserved hypothetical protein.
  
     0.566
EDZ41775.1
Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
 
     0.529
Your Current Organism:
Rhodobacteraceae bacterium HTCC2083
NCBI taxonomy Id: 314270
Other names: R. bacterium HTCC2083, Rhodobacterales bacterium HTCC2083
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.