Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EDZ41032.1 | EDZ41340.1 | RB2083_546 | RB2083_854 | Hypothetical protein; [O] COG0625 Glutathione S-transferase; similarity to glutathione S-transferase; EC_number 2.5.1.18. | [S] COG3814 Uncharacterized protein conserved in bacteria. | 0.668 |
| EDZ41032.1 | EDZ41745.1 | RB2083_546 | RB2083_1260 | Hypothetical protein; [O] COG0625 Glutathione S-transferase; similarity to glutathione S-transferase; EC_number 2.5.1.18. | [L] COG2927 DNA polymerase III, chi subunit. | 0.526 |
| EDZ41032.1 | EDZ43217.1 | RB2083_546 | RB2083_2732 | Hypothetical protein; [O] COG0625 Glutathione S-transferase; similarity to glutathione S-transferase; EC_number 2.5.1.18. | [S] COG3814 Uncharacterized protein conserved in bacteria. | 0.616 |
| EDZ41032.1 | EDZ43250.1 | RB2083_546 | RB2083_2765 | Hypothetical protein; [O] COG0625 Glutathione S-transferase; similarity to glutathione S-transferase; EC_number 2.5.1.18. | [S] COG3820 Uncharacterized protein conserved in bacteria. | 0.501 |
| EDZ41032.1 | EDZ43829.1 | RB2083_546 | RB2083_3344 | Hypothetical protein; [O] COG0625 Glutathione S-transferase; similarity to glutathione S-transferase; EC_number 2.5.1.18. | [S] COG3750 Uncharacterized protein conserved in bacteria. | 0.618 |
| EDZ41032.1 | addA | RB2083_546 | RB2083_3898 | Hypothetical protein; [O] COG0625 Glutathione S-transferase; similarity to glutathione S-transferase; EC_number 2.5.1.18. | Double-strand break repair helicase AddA; [L] COG0210 Superfamily I DNA and RNA helicases; Belongs to the helicase family. UvrD subfamily. | 0.554 |
| EDZ41032.1 | recO | RB2083_546 | RB2083_1982 | Hypothetical protein; [O] COG0625 Glutathione S-transferase; similarity to glutathione S-transferase; EC_number 2.5.1.18. | DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination. | 0.409 |
| EDZ41340.1 | EDZ41032.1 | RB2083_854 | RB2083_546 | [S] COG3814 Uncharacterized protein conserved in bacteria. | Hypothetical protein; [O] COG0625 Glutathione S-transferase; similarity to glutathione S-transferase; EC_number 2.5.1.18. | 0.668 |
| EDZ41340.1 | EDZ41745.1 | RB2083_854 | RB2083_1260 | [S] COG3814 Uncharacterized protein conserved in bacteria. | [L] COG2927 DNA polymerase III, chi subunit. | 0.688 |
| EDZ41340.1 | EDZ41768.1 | RB2083_854 | RB2083_1283 | [S] COG3814 Uncharacterized protein conserved in bacteria. | Import inner membrane translocase, subunit Tim44; [S] COG4395 Uncharacterized protein conserved in bacteria. | 0.687 |
| EDZ41340.1 | EDZ41802.1 | RB2083_854 | RB2083_1317 | [S] COG3814 Uncharacterized protein conserved in bacteria. | [S] COG5465 Uncharacterized conserved protein. | 0.559 |
| EDZ41340.1 | EDZ43250.1 | RB2083_854 | RB2083_2765 | [S] COG3814 Uncharacterized protein conserved in bacteria. | [S] COG3820 Uncharacterized protein conserved in bacteria. | 0.777 |
| EDZ41340.1 | EDZ43829.1 | RB2083_854 | RB2083_3344 | [S] COG3814 Uncharacterized protein conserved in bacteria. | [S] COG3750 Uncharacterized protein conserved in bacteria. | 0.780 |
| EDZ41340.1 | addA | RB2083_854 | RB2083_3898 | [S] COG3814 Uncharacterized protein conserved in bacteria. | Double-strand break repair helicase AddA; [L] COG0210 Superfamily I DNA and RNA helicases; Belongs to the helicase family. UvrD subfamily. | 0.671 |
| EDZ41340.1 | recO | RB2083_854 | RB2083_1982 | [S] COG3814 Uncharacterized protein conserved in bacteria. | DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination. | 0.743 |
| EDZ41745.1 | EDZ41032.1 | RB2083_1260 | RB2083_546 | [L] COG2927 DNA polymerase III, chi subunit. | Hypothetical protein; [O] COG0625 Glutathione S-transferase; similarity to glutathione S-transferase; EC_number 2.5.1.18. | 0.526 |
| EDZ41745.1 | EDZ41340.1 | RB2083_1260 | RB2083_854 | [L] COG2927 DNA polymerase III, chi subunit. | [S] COG3814 Uncharacterized protein conserved in bacteria. | 0.688 |
| EDZ41745.1 | EDZ41802.1 | RB2083_1260 | RB2083_1317 | [L] COG2927 DNA polymerase III, chi subunit. | [S] COG5465 Uncharacterized conserved protein. | 0.628 |
| EDZ41745.1 | EDZ43217.1 | RB2083_1260 | RB2083_2732 | [L] COG2927 DNA polymerase III, chi subunit. | [S] COG3814 Uncharacterized protein conserved in bacteria. | 0.654 |
| EDZ41745.1 | EDZ43250.1 | RB2083_1260 | RB2083_2765 | [L] COG2927 DNA polymerase III, chi subunit. | [S] COG3820 Uncharacterized protein conserved in bacteria. | 0.430 |
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