STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDZ40823.1Transcriptional regulator, GntR family; [K] COG2186 Transcriptional regulators. (248 aa)    
Predicted Functional Partners:
EDZ41526.1
[E] COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component.
 
     0.804
hyuE_2
[E] COG4126 Hydantoin racemase.
 
     0.757
EDZ43929.1
Transcriptional regulator, GntR family; [K] COG1802 Transcriptional regulators.
  
     0.729
EDZ40766.1
Transcriptional regulator, GntR family; [K] COG2186 Transcriptional regulators.
  
     0.725
EDZ42279.1
Transcriptional regulator, GntR family; [K] COG2186 Transcriptional regulators.
  
     0.714
hyuE_1
[E] COG4126 Hydantoin racemase.
 
     0.621
EDZ43608.1
Transcriptional regulator, GntR family; [K] COG1802 Transcriptional regulators.
  
     0.574
EDZ42154.1
[E] COG4177 ABC-type branched-chain amino acid transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.
 
     0.552
EDZ43516.1
[E] COG4126 Hydantoin racemase.
 
     0.552
EDZ43411.1
[E] COG0559 Branched-chain amino acid ABC-type transport system, permease components; Belongs to the binding-protein-dependent transport system permease family.
 
     0.503
Your Current Organism:
Rhodobacteraceae bacterium HTCC2083
NCBI taxonomy Id: 314270
Other names: R. bacterium HTCC2083, Rhodobacterales bacterium HTCC2083
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.