Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EDZ40696.1 | EDZ44012.1 | RB2083_210 | RB2083_3527 | Hypothetical protein. | Integral membrane protein, putative; [H] COG0373 Glutamyl-tRNA reductase. | 0.427 |
| EDZ41006.1 | EDZ41689.1 | RB2083_520 | RB2083_1204 | Peptidoglycan binding domain protein. | Periplasmic serine protease, DO/DeqQ family; [O] COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain. | 0.733 |
| EDZ41006.1 | EDZ44012.1 | RB2083_520 | RB2083_3527 | Peptidoglycan binding domain protein. | Integral membrane protein, putative; [H] COG0373 Glutamyl-tRNA reductase. | 0.515 |
| EDZ41006.1 | degQ | RB2083_520 | RB2083_535 | Peptidoglycan binding domain protein. | Protease DegQ; [O] COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain; Belongs to the peptidase S1C family. | 0.722 |
| EDZ41689.1 | EDZ41006.1 | RB2083_1204 | RB2083_520 | Periplasmic serine protease, DO/DeqQ family; [O] COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain. | Peptidoglycan binding domain protein. | 0.733 |
| EDZ41689.1 | EDZ44012.1 | RB2083_1204 | RB2083_3527 | Periplasmic serine protease, DO/DeqQ family; [O] COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain. | Integral membrane protein, putative; [H] COG0373 Glutamyl-tRNA reductase. | 0.447 |
| EDZ44012.1 | EDZ40696.1 | RB2083_3527 | RB2083_210 | Integral membrane protein, putative; [H] COG0373 Glutamyl-tRNA reductase. | Hypothetical protein. | 0.427 |
| EDZ44012.1 | EDZ41006.1 | RB2083_3527 | RB2083_520 | Integral membrane protein, putative; [H] COG0373 Glutamyl-tRNA reductase. | Peptidoglycan binding domain protein. | 0.515 |
| EDZ44012.1 | EDZ41689.1 | RB2083_3527 | RB2083_1204 | Integral membrane protein, putative; [H] COG0373 Glutamyl-tRNA reductase. | Periplasmic serine protease, DO/DeqQ family; [O] COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain. | 0.447 |
| EDZ44012.1 | degQ | RB2083_3527 | RB2083_535 | Integral membrane protein, putative; [H] COG0373 Glutamyl-tRNA reductase. | Protease DegQ; [O] COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain; Belongs to the peptidase S1C family. | 0.447 |
| EDZ44012.1 | mdh | RB2083_3527 | RB2083_1357 | Integral membrane protein, putative; [H] COG0373 Glutamyl-tRNA reductase. | Malate dehydrogenase, NAD-dependent; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family. | 0.685 |
| EDZ44012.1 | rbsK | RB2083_3527 | RB2083_3711 | Integral membrane protein, putative; [H] COG0373 Glutamyl-tRNA reductase. | Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | 0.516 |
| degQ | EDZ41006.1 | RB2083_535 | RB2083_520 | Protease DegQ; [O] COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain; Belongs to the peptidase S1C family. | Peptidoglycan binding domain protein. | 0.722 |
| degQ | EDZ44012.1 | RB2083_535 | RB2083_3527 | Protease DegQ; [O] COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain; Belongs to the peptidase S1C family. | Integral membrane protein, putative; [H] COG0373 Glutamyl-tRNA reductase. | 0.447 |
| mdh | EDZ44012.1 | RB2083_1357 | RB2083_3527 | Malate dehydrogenase, NAD-dependent; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family. | Integral membrane protein, putative; [H] COG0373 Glutamyl-tRNA reductase. | 0.685 |
| rbsK | EDZ44012.1 | RB2083_3711 | RB2083_3527 | Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | Integral membrane protein, putative; [H] COG0373 Glutamyl-tRNA reductase. | 0.516 |