Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EDZ40588.1 | EDZ43828.1 | RB2083_102 | RB2083_3343 | Sigma-24; [K] COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. | Sensor protein GacS; [T] COG0642 Signal transduction histidine kinase. | 0.410 |
| EDZ40588.1 | EDZ44081.1 | RB2083_102 | RB2083_3596 | Sigma-24; [K] COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. | Hypothetical protein; [R] COG0457 FOG: TPR repeat; tetratricopeptide TPR_2. | 0.629 |
| EDZ41017.1 | EDZ43013.1 | RB2083_531 | RB2083_2528 | Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. | ATPase, AAA family protein; [O] COG0464 ATPases of the AAA+ class. | 0.949 |
| EDZ41017.1 | EDZ43801.1 | RB2083_531 | RB2083_3316 | Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. | Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. | 0.858 |
| EDZ41017.1 | EDZ44081.1 | RB2083_531 | RB2083_3596 | Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. | Hypothetical protein; [R] COG0457 FOG: TPR repeat; tetratricopeptide TPR_2. | 0.619 |
| EDZ41017.1 | EDZ44486.1 | RB2083_531 | RB2083_4001 | Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. | Conserved hypothetical protein; [NT] COG0840 Methyl-accepting chemotaxis protein. | 0.854 |
| EDZ41122.1 | EDZ43917.1 | RB2083_636 | RB2083_3432 | [S] COG3651 Uncharacterized protein conserved in bacteria. | ADP-ribosylation/Crystallin J1. | 0.773 |
| EDZ41122.1 | EDZ44081.1 | RB2083_636 | RB2083_3596 | [S] COG3651 Uncharacterized protein conserved in bacteria. | Hypothetical protein; [R] COG0457 FOG: TPR repeat; tetratricopeptide TPR_2. | 0.476 |
| EDZ41280.1 | EDZ43828.1 | RB2083_794 | RB2083_3343 | Putative secreted protein. | Sensor protein GacS; [T] COG0642 Signal transduction histidine kinase. | 0.902 |
| EDZ41280.1 | EDZ44081.1 | RB2083_794 | RB2083_3596 | Putative secreted protein. | Hypothetical protein; [R] COG0457 FOG: TPR repeat; tetratricopeptide TPR_2. | 0.580 |
| EDZ41280.1 | ribB | RB2083_794 | RB2083_1202 | Putative secreted protein. | Riboflavin biosynthesis protein ribAB; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family. | 0.761 |
| EDZ43013.1 | EDZ41017.1 | RB2083_2528 | RB2083_531 | ATPase, AAA family protein; [O] COG0464 ATPases of the AAA+ class. | Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. | 0.949 |
| EDZ43013.1 | EDZ43801.1 | RB2083_2528 | RB2083_3316 | ATPase, AAA family protein; [O] COG0464 ATPases of the AAA+ class. | Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. | 0.938 |
| EDZ43013.1 | EDZ43828.1 | RB2083_2528 | RB2083_3343 | ATPase, AAA family protein; [O] COG0464 ATPases of the AAA+ class. | Sensor protein GacS; [T] COG0642 Signal transduction histidine kinase. | 0.471 |
| EDZ43013.1 | EDZ44081.1 | RB2083_2528 | RB2083_3596 | ATPase, AAA family protein; [O] COG0464 ATPases of the AAA+ class. | Hypothetical protein; [R] COG0457 FOG: TPR repeat; tetratricopeptide TPR_2. | 0.634 |
| EDZ43013.1 | EDZ44486.1 | RB2083_2528 | RB2083_4001 | ATPase, AAA family protein; [O] COG0464 ATPases of the AAA+ class. | Conserved hypothetical protein; [NT] COG0840 Methyl-accepting chemotaxis protein. | 0.904 |
| EDZ43801.1 | EDZ41017.1 | RB2083_3316 | RB2083_531 | Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. | Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. | 0.858 |
| EDZ43801.1 | EDZ43013.1 | RB2083_3316 | RB2083_2528 | Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. | ATPase, AAA family protein; [O] COG0464 ATPases of the AAA+ class. | 0.938 |
| EDZ43801.1 | EDZ44081.1 | RB2083_3316 | RB2083_3596 | Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. | Hypothetical protein; [R] COG0457 FOG: TPR repeat; tetratricopeptide TPR_2. | 0.625 |
| EDZ43801.1 | EDZ44486.1 | RB2083_3316 | RB2083_4001 | Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. | Conserved hypothetical protein; [NT] COG0840 Methyl-accepting chemotaxis protein. | 0.919 |
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