Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EDZ40637.1 | EDZ40807.1 | RB2083_151 | RB2083_321 | Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. | Phage uncharacterized protein, C-terminal domain, putative; [R] COG5362 Phage-related terminase. | 0.538 |
EDZ40637.1 | EDZ44312.1 | RB2083_151 | RB2083_3827 | Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. | Resolvase, N-terminal domain; [L] COG1961 Site-specific recombinases, DNA invertase Pin homologs. | 0.774 |
EDZ40807.1 | EDZ40637.1 | RB2083_321 | RB2083_151 | Phage uncharacterized protein, C-terminal domain, putative; [R] COG5362 Phage-related terminase. | Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. | 0.538 |
EDZ40807.1 | EDZ44312.1 | RB2083_321 | RB2083_3827 | Phage uncharacterized protein, C-terminal domain, putative; [R] COG5362 Phage-related terminase. | Resolvase, N-terminal domain; [L] COG1961 Site-specific recombinases, DNA invertase Pin homologs. | 0.506 |
EDZ44312.1 | EDZ40637.1 | RB2083_3827 | RB2083_151 | Resolvase, N-terminal domain; [L] COG1961 Site-specific recombinases, DNA invertase Pin homologs. | Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. | 0.774 |
EDZ44312.1 | EDZ40807.1 | RB2083_3827 | RB2083_321 | Resolvase, N-terminal domain; [L] COG1961 Site-specific recombinases, DNA invertase Pin homologs. | Phage uncharacterized protein, C-terminal domain, putative; [R] COG5362 Phage-related terminase. | 0.506 |