Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EDZ41507.1 | EDZ44224.1 | RB2083_1021 | RB2083_3739 | Hypothetical protein. | Transposase, IS4 family protein; [L] COG3293 Transposase and inactivated derivatives. | 0.532 |
EDZ41507.1 | EDZ44325.1 | RB2083_1021 | RB2083_3840 | Hypothetical protein. | Conserved hypothetical protein. | 0.532 |
EDZ41507.1 | EDZ44625.1 | RB2083_1021 | RB2083_4140 | Hypothetical protein. | Transposase OrfA IS5 family element. | 0.468 |
EDZ44224.1 | EDZ41507.1 | RB2083_3739 | RB2083_1021 | Transposase, IS4 family protein; [L] COG3293 Transposase and inactivated derivatives. | Hypothetical protein. | 0.532 |
EDZ44224.1 | EDZ44325.1 | RB2083_3739 | RB2083_3840 | Transposase, IS4 family protein; [L] COG3293 Transposase and inactivated derivatives. | Conserved hypothetical protein. | 0.773 |
EDZ44224.1 | EDZ44625.1 | RB2083_3739 | RB2083_4140 | Transposase, IS4 family protein; [L] COG3293 Transposase and inactivated derivatives. | Transposase OrfA IS5 family element. | 0.909 |
EDZ44325.1 | EDZ41507.1 | RB2083_3840 | RB2083_1021 | Conserved hypothetical protein. | Hypothetical protein. | 0.532 |
EDZ44325.1 | EDZ44224.1 | RB2083_3840 | RB2083_3739 | Conserved hypothetical protein. | Transposase, IS4 family protein; [L] COG3293 Transposase and inactivated derivatives. | 0.773 |
EDZ44325.1 | EDZ44625.1 | RB2083_3840 | RB2083_4140 | Conserved hypothetical protein. | Transposase OrfA IS5 family element. | 0.671 |
EDZ44625.1 | EDZ41507.1 | RB2083_4140 | RB2083_1021 | Transposase OrfA IS5 family element. | Hypothetical protein. | 0.468 |
EDZ44625.1 | EDZ44224.1 | RB2083_4140 | RB2083_3739 | Transposase OrfA IS5 family element. | Transposase, IS4 family protein; [L] COG3293 Transposase and inactivated derivatives. | 0.909 |
EDZ44625.1 | EDZ44325.1 | RB2083_4140 | RB2083_3840 | Transposase OrfA IS5 family element. | Conserved hypothetical protein. | 0.671 |