Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EDZ41828.1 | EDZ44400.1 | RB2083_1343 | RB2083_3915 | Trap dicarboxylate transporter- dctm subunit; [G] COG1593 TRAP-type C4-dicarboxylate transport system, large permease component. | Hypothetical protein. | 0.538 |
EDZ41890.1 | EDZ44400.1 | RB2083_1405 | RB2083_3915 | Trap dicarboxylate transporter- dctm subunit; [R] COG4666 TRAP-type uncharacterized transport system, fused permease components. | Hypothetical protein. | 0.538 |
EDZ41946.1 | EDZ44400.1 | RB2083_1461 | RB2083_3915 | Integral membrane protein DUF6; [GER] COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily. | Hypothetical protein. | 0.594 |
EDZ41946.1 | RB2083_96 | RB2083_1461 | RB2083_96 | Integral membrane protein DUF6; [GER] COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily. | Trap dicarboxylate transporter- dctm subunit; [G] COG1593 TRAP-type C4-dicarboxylate transport system, large permease component. | 0.597 |
EDZ42021.1 | EDZ44400.1 | RB2083_1536 | RB2083_3915 | Trap dicarboxylate transporter, dctm subunit; [C] COG3069 C4-dicarboxylate transporter. | Hypothetical protein. | 0.538 |
EDZ42136.1 | EDZ44400.1 | RB2083_1651 | RB2083_3915 | Trap dicarboxylate transporter- dctm subunit; [R] COG4666 TRAP-type uncharacterized transport system, fused permease components. | Hypothetical protein. | 0.538 |
EDZ42292.1 | EDZ44400.1 | RB2083_1807 | RB2083_3915 | Trap transporter, dctm subunit; [R] COG4666 TRAP-type uncharacterized transport system, fused permease components. | Hypothetical protein. | 0.538 |
EDZ42912.1 | EDZ44400.1 | RB2083_2427 | RB2083_3915 | Trap dicarboxylate transporter, dctm subunit; [R] COG4666 TRAP-type uncharacterized transport system, fused permease components. | Hypothetical protein. | 0.538 |
EDZ42953.1 | EDZ44400.1 | RB2083_2468 | RB2083_3915 | Trap dicarboxylate transporter- dctm subunit; [R] COG4666 TRAP-type uncharacterized transport system, fused permease components. | Hypothetical protein. | 0.538 |
EDZ43235.1 | EDZ44400.1 | RB2083_2750 | RB2083_3915 | Trap dicarboxylate transporter- dctm subunit; [P] COG0471 Di- and tricarboxylate transporters. | Hypothetical protein. | 0.538 |
EDZ44400.1 | EDZ41828.1 | RB2083_3915 | RB2083_1343 | Hypothetical protein. | Trap dicarboxylate transporter- dctm subunit; [G] COG1593 TRAP-type C4-dicarboxylate transport system, large permease component. | 0.538 |
EDZ44400.1 | EDZ41890.1 | RB2083_3915 | RB2083_1405 | Hypothetical protein. | Trap dicarboxylate transporter- dctm subunit; [R] COG4666 TRAP-type uncharacterized transport system, fused permease components. | 0.538 |
EDZ44400.1 | EDZ41946.1 | RB2083_3915 | RB2083_1461 | Hypothetical protein. | Integral membrane protein DUF6; [GER] COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily. | 0.594 |
EDZ44400.1 | EDZ42021.1 | RB2083_3915 | RB2083_1536 | Hypothetical protein. | Trap dicarboxylate transporter, dctm subunit; [C] COG3069 C4-dicarboxylate transporter. | 0.538 |
EDZ44400.1 | EDZ42136.1 | RB2083_3915 | RB2083_1651 | Hypothetical protein. | Trap dicarboxylate transporter- dctm subunit; [R] COG4666 TRAP-type uncharacterized transport system, fused permease components. | 0.538 |
EDZ44400.1 | EDZ42292.1 | RB2083_3915 | RB2083_1807 | Hypothetical protein. | Trap transporter, dctm subunit; [R] COG4666 TRAP-type uncharacterized transport system, fused permease components. | 0.538 |
EDZ44400.1 | EDZ42912.1 | RB2083_3915 | RB2083_2427 | Hypothetical protein. | Trap dicarboxylate transporter, dctm subunit; [R] COG4666 TRAP-type uncharacterized transport system, fused permease components. | 0.538 |
EDZ44400.1 | EDZ42953.1 | RB2083_3915 | RB2083_2468 | Hypothetical protein. | Trap dicarboxylate transporter- dctm subunit; [R] COG4666 TRAP-type uncharacterized transport system, fused permease components. | 0.538 |
EDZ44400.1 | EDZ43235.1 | RB2083_3915 | RB2083_2750 | Hypothetical protein. | Trap dicarboxylate transporter- dctm subunit; [P] COG0471 Di- and tricarboxylate transporters. | 0.538 |
EDZ44400.1 | RB2083_96 | RB2083_3915 | RB2083_96 | Hypothetical protein. | Trap dicarboxylate transporter- dctm subunit; [G] COG1593 TRAP-type C4-dicarboxylate transport system, large permease component. | 0.891 |
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