STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bchCChlorophyll synthesis pathway, bchC; [R] COG1064 Zn-dependent alcohol dehydrogenases. (313 aa)    
Predicted Functional Partners:
EDZ43637.1
Chlorophyllide reductase iron protein subunit X; [D] COG0489 ATPases involved in chromosome partitioning; Belongs to the NifH/BchL/ChlL family.
 
 
 0.996
bchY
Chlorophyllide reductase subunit Y.
 
 
 0.986
bchF
2-vinyl bacteriochlorophyllide hydratase.
 
 
 0.985
bchZ
Chlorophyllide reductase subunit Z; [I] COG0736 Phosphopantetheinyl transferase (holo-ACP synthase).
 
 
 0.984
bchG
Bacteriochlorophyll synthase 33 kDa chain; [H] COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases.
 
 
 0.972
crtF
[QR] COG0500 SAM-dependent methyltransferases.
  
 0.963
bchD
Magnesium chelatase ATPase subunit D; Involved in bacteriochlorophyll biosynthesis; introduces a magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX.
  
 
 0.913
bchH
Magnesium chelatase, H subunit; [H] COG1429 Cobalamin biosynthesis protein CobN and related Mg-chelatases.
  
  
 0.895
EDZ43496.1
Putative magnesium chelatase accessory protein; [R] COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
  
 
 0.889
bchN
Light-independent protochlorophyllide reductase, N subunit; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein (BchN-BchB) is the catalytic component of the complex.
  
  
 0.883
Your Current Organism:
Rhodobacteraceae bacterium HTCC2083
NCBI taxonomy Id: 314270
Other names: R. bacterium HTCC2083, Rhodobacterales bacterium HTCC2083
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