STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bztB[E] COG0765 ABC-type amino acid transport system, permease component. (394 aa)    
Predicted Functional Partners:
EDZ41575.1
[E] COG0765 ABC-type amino acid transport system, permease component.
 
0.999
EDZ43635.1
Glutamate/glutamine/aspartate/asparagine ABC transporter, periplasmic substrate-binding protein; [ET] COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
 
 
 0.985
EDZ42249.1
Glutamate/glutamine/aspartate/asparagine ABC transporter, ATP-binding protein; [E] COG1126 ABC-type polar amino acid transport system, ATPase component.
 
 
 0.983
aapP
General amino acid ABC transporter, ATP-binding protein; [E] COG3842 ABC-type spermidine/putrescine transport systems, ATPase components.
 
 
 0.953
EDZ41413.1
Amino acid ABC transporter, ATP-binding protein; [P] COG1135 ABC-type metal ion transport system, ATPase component.
 
 
 0.947
gluA
Glutamate/aspartate transport protein, ABC superfamily; [P] COG1135 ABC-type metal ion transport system, ATPase component.
 
 
 0.934
EDZ42532.1
His/Glu/Gln/Arg/opine family ABC transporter, permease protein; [E] COG0765 ABC-type amino acid transport system, permease component.
 
 
 0.913
EDZ42037.1
[ET] COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
 
 
 0.797
EDZ40908.1
[E] COG0765 ABC-type amino acid transport system, permease component.
 
0.788
EDZ40874.1
Glutamine ABC transporter permease protein; [E] COG4215 ABC-type arginine transport system, permease component.
 
 
0.766
Your Current Organism:
Rhodobacteraceae bacterium HTCC2083
NCBI taxonomy Id: 314270
Other names: R. bacterium HTCC2083, Rhodobacterales bacterium HTCC2083
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