STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDZ41004.1Maltose/maltodextrin import ATP-binding protein MalK; [G] COG3839 ABC-type sugar transport systems, ATPase components; Belongs to the ABC transporter superfamily. (331 aa)    
Predicted Functional Partners:
EDZ43525.1
[G] COG0395 ABC-type sugar transport system, permease component.
 0.989
EDZ43051.1
[G] COG1175 ABC-type sugar transport systems, permease components.
 
  0.974
EDZ44042.1
ABC transporter substrate-binding protein; [G] COG1653 ABC-type sugar transport system, periplasmic component.
 
  0.960
ycjP
[G] COG0395 ABC-type sugar transport system, permease component.
 
 0.945
EDZ42946.1
[G] COG1175 ABC-type sugar transport systems, permease components.
 
  0.935
ugpE
Sn-glycerol-3-phosphate transport system permease protein; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane.
 0.890
EDZ44621.1
Binding-protein-dependent transport systems inner membrane component; [G] COG0395 ABC-type sugar transport system, permease component.
 
 0.877
EDZ44465.1
ABC transporter, ATP-binding protein; [G] COG3839 ABC-type sugar transport systems, ATPase components; Belongs to the ABC transporter superfamily.
 
  
 
0.863
EDZ41665.1
Binding-protein-dependent transport systems inner membrane component; [G] COG0395 ABC-type sugar transport system, permease component.
  0.861
EDZ42847.1
[G] COG1175 ABC-type sugar transport systems, permease components.
 
  0.857
Your Current Organism:
Rhodobacteraceae bacterium HTCC2083
NCBI taxonomy Id: 314270
Other names: R. bacterium HTCC2083, Rhodobacterales bacterium HTCC2083
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