EDZ41121.1 protein (Rhodobacteraceae bacterium HTCC2083)

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Score

EDZ41121.1

Hypothetical protein. (60 aa)

Predicted Functional Partners:

rpsJ

0.727

rplC

0.698

rplW

0.698

rplD

0.698

tuf_1

0.435

Your Current Organism:

Rhodobacteraceae bacterium HTCC2083

NCBI taxonomy Id: 314270
Other names: R. bacterium HTCC2083, Rhodobacterales bacterium HTCC2083

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EDZ41121.1	rplC	RB2083_635	RB2083_1610	Hypothetical protein.	Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	0.698
EDZ41121.1	rplD	RB2083_635	RB2083_988	Hypothetical protein.	Ribosomal protein L4/L1 family; Forms part of the polypeptide exit tunnel.	0.698
EDZ41121.1	rplW	RB2083_635	RB2083_3273	Hypothetical protein.	Ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.	0.698
EDZ41121.1	rpsJ	RB2083_635	RB2083_1847	Hypothetical protein.	Ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.	0.727
EDZ41121.1	tuf_1	RB2083_635	RB2083_1726	Hypothetical protein.	Translation elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.	0.435
rplC	EDZ41121.1	RB2083_1610	RB2083_635	Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	Hypothetical protein.	0.698
rplC	rplD	RB2083_1610	RB2083_988	Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	Ribosomal protein L4/L1 family; Forms part of the polypeptide exit tunnel.	0.999
rplC	rplW	RB2083_1610	RB2083_3273	Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	Ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.	0.999
rplC	rpsJ	RB2083_1610	RB2083_1847	Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	Ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.	0.999
rplC	tuf_1	RB2083_1610	RB2083_1726	Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	Translation elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.	0.997
rplD	EDZ41121.1	RB2083_988	RB2083_635	Ribosomal protein L4/L1 family; Forms part of the polypeptide exit tunnel.	Hypothetical protein.	0.698
rplD	rplC	RB2083_988	RB2083_1610	Ribosomal protein L4/L1 family; Forms part of the polypeptide exit tunnel.	Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	0.999
rplD	rplW	RB2083_988	RB2083_3273	Ribosomal protein L4/L1 family; Forms part of the polypeptide exit tunnel.	Ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.	0.999
rplD	rpsJ	RB2083_988	RB2083_1847	Ribosomal protein L4/L1 family; Forms part of the polypeptide exit tunnel.	Ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.	0.999
rplD	tuf_1	RB2083_988	RB2083_1726	Ribosomal protein L4/L1 family; Forms part of the polypeptide exit tunnel.	Translation elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.	0.998
rplW	EDZ41121.1	RB2083_3273	RB2083_635	Ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.	Hypothetical protein.	0.698
rplW	rplC	RB2083_3273	RB2083_1610	Ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.	Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	0.999
rplW	rplD	RB2083_3273	RB2083_988	Ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.	Ribosomal protein L4/L1 family; Forms part of the polypeptide exit tunnel.	0.999
rplW	rpsJ	RB2083_3273	RB2083_1847	Ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.	Ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.	0.999
rplW	tuf_1	RB2083_3273	RB2083_1726	Ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.	Translation elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.	0.997