STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDZ41184.12-aminoethylphosphonate transport, putative; [E] COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase. (428 aa)    
Predicted Functional Partners:
EDZ42040.1
CDP-alcohol phosphatidyltransferase family; [I] COG0558 Phosphatidylglycerophosphate synthase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
 
  
  0.941
EDZ41762.1
Phosphoenolpyruvate phosphomutase; [MI] COG0615 Cytidylyltransferase.
 
 
 0.871
EDZ40734.1
Nucleotidyl transferase superfamily; [MJ] COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon).
    0.851
EDZ42533.1
Aminotransferase, putative; [E] COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase.
  
  
  0.809
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
  
 
 0.730
serB
Phosphoserine phosphatase SerB; [R] COG0561 Predicted hydrolases of the HAD superfamily.
   
 0.708
EDZ42557.1
D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; [CHR] COG1052 Lactate dehydrogenase and related dehydrogenases.
  
 
 0.701
glcB
Malate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily.
  
 
 0.693
ltaE
Threonine aldolase, low-specificity; [E] COG2008 Threonine aldolase.
    
 0.678
gcvH
Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.
     
 0.661
Your Current Organism:
Rhodobacteraceae bacterium HTCC2083
NCBI taxonomy Id: 314270
Other names: R. bacterium HTCC2083, Rhodobacterales bacterium HTCC2083
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