STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDZ41220.1Conserved hypothetical protein. (120 aa)    
Predicted Functional Partners:
rppH
(Di)nucleoside polyphosphate hydrolase; Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage; Belongs to the Nudix hydrolase family. RppH subfamily.
       0.705
EDZ43016.1
Conserved hypothetical protein.
  
     0.462
EDZ42336.1
Conserved hypothetical protein.
  
     0.447
EDZ44407.1
Endonuclease/exonuclease/phosphatase, putative.
  
     0.445
EDZ42921.1
Conserved hypothetical protein.
  
     0.430
EDZ40850.1
Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.428
EDZ41661.1
Conserved hypothetical protein.
  
     0.411
EDZ44081.1
Hypothetical protein; [R] COG0457 FOG: TPR repeat; tetratricopeptide TPR_2.
  
     0.409
EDZ44216.1
OmpA/MotB.
  
     0.401
EDZ44387.1
[M] COG0845 Membrane-fusion protein.
  
     0.401
Your Current Organism:
Rhodobacteraceae bacterium HTCC2083
NCBI taxonomy Id: 314270
Other names: R. bacterium HTCC2083, Rhodobacterales bacterium HTCC2083
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.