Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EDZ41038.1 | EDZ41241.1 | RB2083_552 | RB2083_755 | Conserved hypothetical protein; [EJ] COG0252 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D. | Conserved hypothetical protein. | 0.563 |
EDZ41038.1 | EDZ44241.1 | RB2083_552 | RB2083_3756 | Conserved hypothetical protein; [EJ] COG0252 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D. | Putative RND superfamily transporter; [V] COG0841 Cation/multidrug efflux pump. | 0.978 |
EDZ41038.1 | RB2083_68 | RB2083_552 | RB2083_68 | Conserved hypothetical protein; [EJ] COG0252 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D. | Hypothetical protein. | 0.718 |
EDZ41241.1 | EDZ41038.1 | RB2083_755 | RB2083_552 | Conserved hypothetical protein. | Conserved hypothetical protein; [EJ] COG0252 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D. | 0.563 |
EDZ41241.1 | EDZ44241.1 | RB2083_755 | RB2083_3756 | Conserved hypothetical protein. | Putative RND superfamily transporter; [V] COG0841 Cation/multidrug efflux pump. | 0.773 |
EDZ41241.1 | RB2083_68 | RB2083_755 | RB2083_68 | Conserved hypothetical protein. | Hypothetical protein. | 0.603 |
EDZ44241.1 | EDZ41038.1 | RB2083_3756 | RB2083_552 | Putative RND superfamily transporter; [V] COG0841 Cation/multidrug efflux pump. | Conserved hypothetical protein; [EJ] COG0252 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D. | 0.978 |
EDZ44241.1 | EDZ41241.1 | RB2083_3756 | RB2083_755 | Putative RND superfamily transporter; [V] COG0841 Cation/multidrug efflux pump. | Conserved hypothetical protein. | 0.773 |
EDZ44241.1 | RB2083_68 | RB2083_3756 | RB2083_68 | Putative RND superfamily transporter; [V] COG0841 Cation/multidrug efflux pump. | Hypothetical protein. | 0.603 |
RB2083_68 | EDZ41038.1 | RB2083_68 | RB2083_552 | Hypothetical protein. | Conserved hypothetical protein; [EJ] COG0252 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D. | 0.718 |
RB2083_68 | EDZ41241.1 | RB2083_68 | RB2083_755 | Hypothetical protein. | Conserved hypothetical protein. | 0.603 |
RB2083_68 | EDZ44241.1 | RB2083_68 | RB2083_3756 | Hypothetical protein. | Putative RND superfamily transporter; [V] COG0841 Cation/multidrug efflux pump. | 0.603 |