STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDZ41282.1[C] COG2010 Cytochrome c, mono- and diheme variants. (141 aa)    
Predicted Functional Partners:
EDZ44055.1
Cytochrome c, class I; [C] COG3474 Cytochrome c2.
   
 0.988
petA
Ubiquinol-cytochrome c reductase, iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 0.978
EDZ41188.1
Cytochrome B/c1; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 0.975
EDZ40828.1
[C] COG1845 Heme/copper-type cytochrome/quinol oxidase, subunit 3.
  
 0.970
ccoO
[C] COG2993 Cbb3-type cytochrome oxidase, cytochrome c subunit.
  
 0.963
ccoN
[C] COG0843 Heme/copper-type cytochrome/quinol oxidases, subunit 1; Belongs to the heme-copper respiratory oxidase family.
  
 0.950
EDZ42302.1
[Q] COG2132 Putative multicopper oxidases.
 
 
 0.940
soxE
[C] COG2863 Cytochrome c553.
  
 0.915
EDZ41620.1
Molybdopterin oxidoreductase Fe4S4 domain family; [C] COG5013 Nitrate reductase alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 0.900
EDZ42711.1
Selenium-binding protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
 0.887
Your Current Organism:
Rhodobacteraceae bacterium HTCC2083
NCBI taxonomy Id: 314270
Other names: R. bacterium HTCC2083, Rhodobacterales bacterium HTCC2083
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.