STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cysBCysteine synthase; [E] COG1171 Threonine dehydratase. (345 aa)    
Predicted Functional Partners:
EDZ40671.1
Transferase hexapeptide repeat containing protein; [R] COG0110 Acetyltransferase (isoleucine patch superfamily).
 
 0.990
cysE_1
Serine acetyltransferase; [E] COG2171 Tetrahydrodipicolinate N-succinyltransferase.
 
 0.990
cysE_2
Serine O-acetyltransferase; [R] COG0110 Acetyltransferase (isoleucine patch superfamily).
 
 0.990
EDZ43536.1
[E] COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases.
 0.977
metZ
O-succinylhomoserine sulfhydrylase; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide.
 0.975
metC
Cystathionine beta-lyase; [E] COG0436 Aspartate/tyrosine/aromatic aminotransferase.
 0.975
cysI
[C] COG2221 Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
  
 
 0.962
sat
Sulfate adenylyltransferase; Catalyzes the synthesis of activated sulfate.
  
  
 0.933
metY
O-acetylhomoserine sulfhydrylase; [E] COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases.
 
 0.919
ahcY
Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.
  
 0.919
Your Current Organism:
Rhodobacteraceae bacterium HTCC2083
NCBI taxonomy Id: 314270
Other names: R. bacterium HTCC2083, Rhodobacterales bacterium HTCC2083
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