STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
soxSSoxS. (112 aa)    
Predicted Functional Partners:
soxW
[O] COG2143 Thioredoxin-related protein.
 
     0.923
EDZ40857.1
YeeE/YedE domain protein; [R] COG2391 Predicted transporter component.
 
     0.904
soxY
Sulfur oxidation Y protein; [S] COG5501 Predicted secreted protein.
 
   
 0.819
soxZ
Sulfur oxidation Z protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
 
     0.818
soxA
Diheme Cytochrome c SoxA; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
 
     0.807
EDZ41353.1
YeeE/YedE family protein; [R] COG2391 Predicted transporter component.
 
     0.806
EDZ44055.1
Cytochrome c, class I; [C] COG3474 Cytochrome c2.
 
     0.800
soxB_1
Sulfur oxidation B protein; [F] COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases; Belongs to the 5'-nucleotidase family.
 
   
 0.782
soxC
Sulfite dehydrogenase SoxC protein; [R] COG2041 Sulfite oxidase and related enzymes.
 
     0.779
EDZ44045.1
[K] COG0640 Predicted transcriptional regulators.
 
     0.763
Your Current Organism:
Rhodobacteraceae bacterium HTCC2083
NCBI taxonomy Id: 314270
Other names: R. bacterium HTCC2083, Rhodobacterales bacterium HTCC2083
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.