STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDZ41370.1Glycine betaine/proline ABC transporter, permease protein; [G] COG1175 ABC-type sugar transport systems, permease components. (657 aa)    
Predicted Functional Partners:
proV
Glycine betaine/L-proline ABC transporter, ATP-binding protein; [E] COG0241 Histidinol phosphatase and related phosphatases.
 0.998
opuAA_1
Glycine betaine transporter, ATP-binding protein; [E] COG3842 ABC-type spermidine/putrescine transport systems, ATPase components.
 0.994
opuAA_2
Glycine betaine transporter, ATP-binding protein; [E] COG3842 ABC-type spermidine/putrescine transport systems, ATPase components.
 0.994
EDZ42168.1
Glycine betaine/proline ABC transporter, periplasmic substrate-binding protein; [E] COG2113 ABC-type proline/glycine betaine transport systems, periplasmic components.
 
 
 0.990
EDZ42625.1
Glycine betaine/proline ABC transporter, periplasmic substrate-binding protein; [E] COG2113 ABC-type proline/glycine betaine transport systems, periplasmic components.
 
 
 0.971
opuAC
Glycine betaine transporter, substrate-binding protein; [E] COG2113 ABC-type proline/glycine betaine transport systems, periplasmic components.
 
 0.960
soxG
[E] COG4583 Sarcosine oxidase gamma subunit.
 
    0.555
EDZ41517.1
Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.528
EDZ41656.1
Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.528
soxD_1
[E] COG4311 Sarcosine oxidase delta subunit.
 
    0.469
Your Current Organism:
Rhodobacteraceae bacterium HTCC2083
NCBI taxonomy Id: 314270
Other names: R. bacterium HTCC2083, Rhodobacterales bacterium HTCC2083
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.