STRINGSTRING
RB2654_00700 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_00700" - Uncharacterized protein in Maritimibacter alkaliphilus
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_00700Uncharacterized protein (126 aa)    
Predicted Functional Partners:
RB2654_00705
Uncharacterized protein (723 aa)
 
          0.868
RB2654_00685
Uncharacterized protein (158 aa)
 
          0.772
RB2654_00545
T-DNA border endonuclease (642 aa)
   
          0.743
RB2654_00660
Uncharacterized protein (348 aa)
 
          0.731
RB2654_00505
VirB8 type IV secretion protein (188 aa)
   
          0.717
RB2654_00500
Vir-like protein (337 aa)
   
          0.691
RB2654_00695
Uncharacterized protein (98 aa)
              0.569
RB2654_00475
Type IV secretion system protein B4, putative (792 aa)
   
          0.563
RB2654_00665
Probably methylase/helicase (1465 aa)
 
          0.562
RB2654_00540
Type IV secretion system coupling protein (640 aa)
   
          0.538
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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