STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ12029.1Alkylphosphonate utilization operon protein PhnA; COG2824 Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism. (109 aa)    
Predicted Functional Partners:
EAQ12028.1
Coenzyme A transferase, putative; COG0427 Acetyl-CoA hydrolase.
       0.601
EAQ13909.1
COG0659 Sulfate permease and related transporters (MFS superfamily).
 
  
 0.534
EAQ14200.1
COG0142 Geranylgeranyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family.
      0.521
EAQ14991.1
COG0659 Sulfate permease and related transporters (MFS superfamily).
 
  
 0.485
rplQ
COG0203 Ribosomal protein L17.
   
    0.426
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus HTCC2654, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.