STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ12075.1Hypothetical protein; COG0181 Porphobilinogen deaminase. (94 aa)    
Predicted Functional Partners:
EAQ12074.1
COG3755 Uncharacterized protein conserved in bacteria.
       0.773
EAQ12076.1
Hypothetical protein.
       0.773
EAQ12073.1
COG1960 Acyl-CoA dehydrogenases.
       0.634
EAQ12078.1
COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta).
       0.501
EAQ12079.1
Predicted phosphatase; Similar to the C-terminal domain of histone; COG2110 Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1.
       0.501
EAQ12080.1
Methyltransferase; COG0500 SAM-dependent methyltransferases.
       0.501
EAQ12081.1
COG4770 Acetyl/propionyl-CoA carboxylase, alpha subunit.
       0.501
EAQ12082.1
COG0625 Glutathione S-transferase.
       0.501
EAQ12083.1
hydroxymethylglutaryl-CoA lyase; COG0119 Isopropylmalate/homocitrate/citramalate synthases.
       0.501
EAQ12084.1
COG1024 Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family.
       0.501
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus HTCC2654, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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