STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ12134.1COG3239 Fatty acid desaturase. (334 aa)    
Predicted Functional Partners:
EAQ10540.1
COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1.
  
 
 0.725
EAQ11795.1
Ferredoxin; COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1.
  
 
 0.725
EAQ12709.1
Phenylacetic acid degradation oxidoreductase PaaK; COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1.
  
 
 0.725
EAQ12980.1
Possible dioxygenase reductase subunit; COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1.
  
 
 0.725
EAQ14773.1
Ferredoxin:Oxidoreductase FAD/NAD(P)-binding:Oxidoreductase FAD-binding region protein; COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1.
  
 
 0.725
EAQ10827.1
Ferredoxin:Oxidoreductase FAD/NAD(P)-binding:Oxidoreductase FAD-binding region protein; COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1.
  
 
 0.725
EAQ13116.1
Hypothetical protein; COG3000 Sterol desaturase.
 
 
 0.668
tatC
Twin-arginine translocation system protein, TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides.
 
     0.573
EAQ11891.1
Fatty acid synthase transmembrane protein; COG3321 Polyketide synthase modules and related proteins.
  
 
 0.524
tatB
Twin-arginine translocation system protein, TatB; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation.
       0.511
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus HTCC2654, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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