STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ11441.1COG0659 Sulfate permease and related transporters (MFS superfamily). (589 aa)    
Predicted Functional Partners:
EAQ11891.1
Fatty acid synthase transmembrane protein; COG3321 Polyketide synthase modules and related proteins.
   
 
 0.919
EAQ12503.1
COG1290 Cytochrome b subunit of the bc complex.
    
   0.912
EAQ10645.1
Hypothetical protein; COG0420 DNA repair exonuclease.
   
   0.868
EAQ11439.1
Beta-lactamase-like; COG0491 Zn-dependent hydrolases, including glyoxylases.
     0.736
EAQ11440.1
COG3453 Uncharacterized protein conserved in bacteria.
 
     0.713
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
    
  0.691
EAQ14638.1
Bifunctional putA protein; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
   
 
  0.686
EAQ12110.1
COG1008 NADH:ubiquinone oxidoreductase subunit 4 (chain M).
  
 
 0.632
EAQ11437.1
Putative membrane protein; COG2391 Predicted transporter component.
 
    0.626
EAQ11438.1
Hypothetical protein; COG2391 Predicted transporter component.
    0.591
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus HTCC2654, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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