STRINGSTRING
RB2654_01930 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_01930" - Uncharacterized protein in Maritimibacter alkaliphilus
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_01930Uncharacterized protein (256 aa)    
Predicted Functional Partners:
RB2654_17926
Uncharacterized protein (70 aa)
   
          0.706
RB2654_17306
Uncharacterized protein (103 aa)
   
          0.580
dusA
tRNA-dihydrouridine synthase A ; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U20 and U20a in tRNAs (313 aa)
              0.572
RB2654_12524
DoxD-like family protein (134 aa)
   
          0.569
RB2654_06187
Phospholipase D/Transphosphatidylase (523 aa)
   
          0.542
RB2654_19748
Uncharacterized protein (291 aa)
   
          0.541
RB2654_12954
Cation antiporter (Na+/Ca2+) (344 aa)
   
          0.534
nhaA
Sodium/proton antiporter NhaA ; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons (432 aa)
   
          0.510
RB2654_22993
Legionella vir homologue protein (341 aa)
   
          0.435
RB2654_23008
Conjugal transfer protein (441 aa)
   
          0.431
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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