STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ13482.1COG5622 Protein required for attachment to host cells. (151 aa)    
Predicted Functional Partners:
EAQ13481.1
Transcriptional regulator, LysR family protein; COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
 
     0.638
EAQ11295.1
COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins.
  
     0.580
EAQ13483.1
RarD; COG2962 Predicted permeases.
       0.573
EAQ11325.1
Sensory transduction histidine kinase; COG2202 FOG: PAS/PAC domain.
 
     0.531
EAQ10971.1
COG4991 Uncharacterized protein with a bacterial SH3 domain homologue.
  
     0.469
EAQ13177.1
Two-component response regulator; COG0784 FOG: CheY-like receiver.
  
     0.445
EAQ13982.1
Cation antiporter (Na+/Ca2+); COG0530 Ca2+/Na+ antiporter.
  
     0.421
EAQ13480.1
Hypothetical protein.
       0.416
EAQ10674.1
Phospholipase D/Transphosphatidylase; COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes.
  
     0.409
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus HTCC2654, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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