STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ13485.1lysM domain protein; COG1652 Uncharacterized protein containing LysM domain. (624 aa)    
Predicted Functional Partners:
EAQ12816.1
COG3497 Phage tail sheath protein FI.
  
 
 0.944
EAQ12802.1
Hypothetical protein; COG0464 ATPases of the AAA+ class.
  
 
 0.932
EAQ12803.1
COG3628 Phage baseplate assembly protein W.
  
   0.931
EAQ12815.1
Hypothetical protein.
  
   0.918
EAQ12806.1
Hypothetical protein.
   
   0.914
EAQ13484.1
Decarboxylase family protein; COG1611 Predicted Rossmann fold nucleotide-binding protein; Belongs to the LOG family.
    
  0.753
EAQ13486.1
ABC transporter, ATP-binding/permease protein; COG5265 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components.
       0.739
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
    
  0.670
EAQ11082.1
Hypothetical protein.
  
 
   0.610
EAQ13128.1
LysM domain protein; COG1652 Uncharacterized protein containing LysM domain.
  
     0.570
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus HTCC2654, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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