STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ13503.1Hypothetical protein; COG0419 ATPase involved in DNA repair. (254 aa)    
Predicted Functional Partners:
EAQ13502.1
Hypothetical protein; COG2995 Uncharacterized paraquat-inducible protein A.
       0.773
EAQ15012.1
Hypothetical protein.
  
     0.602
EAQ13919.1
Membrane protein, putative.
  
     0.579
radA
DNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function.
       0.554
EAQ10462.1
Lipoprotein, putative.
  
     0.540
EAQ13500.1
COG1286 Uncharacterized membrane protein, required for colicin V production.
       0.518
EAQ12127.1
Hypothetical protein; COG1372 Intein/homing endonuclease.
  
     0.514
EAQ10500.1
Hypothetical protein.
  
     0.493
EAQ13504.1
Hypothetical protein; COG0419 ATPase involved in DNA repair.
 
    
0.457
EAQ14650.1
Hypothetical protein.
  
     0.448
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus HTCC2654, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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