STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ13567.1COG3814 Uncharacterized protein conserved in bacteria. (168 aa)    
Predicted Functional Partners:
EAQ11946.1
COG3750 Uncharacterized protein conserved in bacteria.
  
   
 0.784
EAQ10713.1
COG3820 Uncharacterized protein conserved in bacteria.
  
   
 0.783
recO
DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.
  
     0.751
EAQ13684.1
COG2927 DNA polymerase III, chi subunit.
  
     0.736
EAQ12304.1
COG3807 Uncharacterized protein conserved in bacteria.
  
     0.735
EAQ12340.1
Helicase, UvrD/Rep family protein; COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains); Belongs to the helicase family. UvrD subfamily.
  
     0.718
lysS
COG1384 Lysyl-tRNA synthetase (class I); Belongs to the class-I aminoacyl-tRNA synthetase family.
  
     0.709
EAQ13568.1
COG2059 Chromate transport protein ChrA.
       0.706
EAQ14086.1
COG4395 Uncharacterized protein conserved in bacteria.
  
     0.685
EAQ12676.1
COG0625 Glutathione S-transferase.
  
     0.676
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus HTCC2654, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.