STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ13615.1Putative transcriptional regulator; COG2207 AraC-type DNA-binding domain-containing proteins. (175 aa)    
Predicted Functional Partners:
EAQ12670.1
Glutamate synthase, large subunit; COG0070 Glutamate synthase domain 3.
    
  0.687
rpoA
DNA-directed RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.576
EAQ13613.1
Iron-sulfur cluster-binding protein; COG0633 Ferredoxin.
       0.559
EAQ13614.1
COG2124 Cytochrome P450.
       0.559
EAQ13616.1
Transcriptional regulatory protein; COG1414 Transcriptional regulator.
  
  
 0.551
EAQ14107.1
Phosphate acetyltransferase; COG0281 Malic enzyme.
     
 0.521
EAQ15065.1
COG0281 Malic enzyme.
     
 0.521
EAQ13617.1
Hypothetical protein; COG2159 Predicted metal-dependent hydrolase of the TIM-barrel fold.
       0.499
EAQ13618.1
COG1012 NAD-dependent aldehyde dehydrogenases; Belongs to the aldehyde dehydrogenase family.
       0.496
EAQ13619.1
Hypothetical protein; COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases.
       0.496
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus HTCC2654, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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