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RB2654_03149 protein (Maritimibacter alkaliphilus) - STRING interaction network
"RB2654_03149" - Uncharacterized protein in Maritimibacter alkaliphilus
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RB2654_03149Uncharacterized protein (388 aa)    
Predicted Functional Partners:
RB2654_03144
Exodeoxyribonuclease III (267 aa)
              0.643
RB2654_03139
Inosine-uridine preferring nucleoside hydrolase (314 aa)
              0.638
RB2654_03134
UPF0061 protein RB2654_03134 (470 aa)
              0.600
tyrS
Tyrosyl-tRNA synthetase ; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction- tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) (421 aa)
              0.593
RB2654_03159
Uncharacterized protein (381 aa)
 
          0.553
RB2654_08567
Pseudouridine synthase (293 aa)
     
      0.493
RB2654_01130
Pseudouridine synthase (181 aa)
     
      0.492
RB2654_23198
Uncharacterized protein (197 aa)
              0.435
RB2654_22003
Uncharacterized protein (198 aa)
              0.435
RB2654_18313
30S ribosomal protein S1 ; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence (554 aa)
              0.435
Your Current Organism:
Maritimibacter alkaliphilus
NCBI taxonomy Id: 314271
Other names: M. alkaliphilus, M. alkaliphilus HTCC2654, Maritimibacter, Maritimibacter Lee et al. 2007, Maritimibacter alkaliphilus, Maritimibacter alkaliphilus HTCC2654, Maritimibacter alkaliphilus Lee et al. 2007, Maritimibacter alkaliphilus str. HTCC2654, Maritimibacter alkaliphilus strain HTCC2654, Rhodobacterales bacterium HTCC2654
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